Uses of Interface
org.biojava.utils.ParseErrorSource

Packages that use ParseErrorSource

org.biojava.bio.program.phred	Parser for Phred output
org.biojava.bio.seq.io	Classes and interfaces for processing and producing flat-file representations of sequences.

Uses of ParseErrorSource in org.biojava.bio.program.phred

Classes in org.biojava.bio.program.phred that implement ParseErrorSource

class

PhredFormat Format object representing Phred Quality files.

Uses of ParseErrorSource in org.biojava.bio.seq.io

Classes in org.biojava.bio.seq.io that implement ParseErrorSource

class	EmblLikeFormat Format processor for handling EMBL records and similar files.
class	EmblProcessor Simple filter which handles attribute lines from an EMBL file.
class	FastaFormat Format object representing FASTA files.
class	GenbankFormat Format reader for GenBank files.
class	GenbankProcessor Simple filter which handles attribute lines from a Genbank file
class	GenpeptFormat This class is necessitated by the deprecation of writeSequence(Sequence seq, String format, PrintStream os) method.
class	ProteinRefSeqProcessor Class description
class	SwissprotProcessor Simple filter which handles attribute lines from an Swissprot entry.