Uses of Package
org.biojava.bio.taxa

Packages that use org.biojava.bio.taxa

org.biojava.bio.seq.db.biosql	General purpose Sequence storage in a relational database.
org.biojava.bio.seq.io	Classes and interfaces for processing and producing flat-file representations of sequences.
org.biojava.bio.taxa	Taxonomy object for representing species information.

Classes in org.biojava.bio.taxa used by org.biojava.bio.seq.db.biosql

Taxon
A taxon within a classification.

Classes in org.biojava.bio.taxa used by org.biojava.bio.seq.io

TaxonFactory
Factory for handling a particular implementation of a Taxon.

TaxonParser
Encapsulate the mapping between Taxon and stringified representations of taxa.

Classes in org.biojava.bio.taxa used by org.biojava.bio.taxa

AbstractTaxon
An abstract implementation of Taxon.

CircularReferenceException

EbiFormat
Encapsulate the 'EBI' species format used in Embl, Genbank and Swissprot files.

SimpleTaxonFactory
A no-frills implementation of TaxaFactory that builds an in-memory Taxa tree.

Taxon
A taxon within a classification.

TaxonFactory
Factory for handling a particular implementation of a Taxon.

TaxonParser
Encapsulate the mapping between Taxon and stringified representations of taxa.

WeakTaxonFactory
An implementation of TaxonFactory that builds a weak in-memory Taxon tree.