Uses of Interface
org.biojava.bio.taxa.TaxonFactory

Packages that use TaxonFactory

org.biojava.bio.seq.io	Classes and interfaces for processing and producing flat-file representations of sequences.
org.biojava.bio.taxa	Taxonomy object for representing species information.

Uses of TaxonFactory in org.biojava.bio.seq.io

Constructors in org.biojava.bio.seq.io with parameters of type TaxonFactory

OrganismParser(SequenceBuilder delegate, TaxonFactory taxonFactory, TaxonParser taxonParser, String sciNameKey, String commonNameKey, String ncbiTaxonKey)

OrganismParser.Factory(SequenceBuilderFactory delegateFactory, TaxonFactory taxonFactory, TaxonParser taxonParser, String sciNameKey, String commonNameKey, String ncbiTaxonKey)

Uses of TaxonFactory in org.biojava.bio.taxa

Classes in org.biojava.bio.taxa that implement TaxonFactory

class	SimpleTaxonFactory A no-frills implementation of TaxaFactory that builds an in-memory Taxa tree.
class	WeakTaxonFactory An implementation of TaxonFactory that builds a weak in-memory Taxon tree.

Methods in org.biojava.bio.taxa with parameters of type TaxonFactory

Taxon	TaxonParser.parse(TaxonFactory taxonFactory, String taxonString) Convert a stringified Taxon into a Taxon instance.
Taxon	EbiFormat.parse(TaxonFactory taxonFactory, String taxonString)