Hierarchy For Package org.biojava.bio.program.ssaha

Package Hierarchies:

All Packages

Class Hierarchy

• class java.lang.Object
  • class org.biojava.bio.program.ssaha.CompactedDataStore (implements org.biojava.bio.program.ssaha.DataStore)
  • class org.biojava.bio.program.ssaha.CompactedDataStoreFactory (implements org.biojava.bio.program.ssaha.DataStoreFactory)
  • class org.biojava.bio.program.ssaha.HitMerger (implements org.biojava.bio.program.ssaha.SearchListener)
  • class org.biojava.bio.program.ssaha.MappedDataStoreFactory (implements org.biojava.bio.program.ssaha.DataStoreFactory)
  • class org.biojava.bio.program.ssaha.NIODataStoreFactory (implements org.biojava.bio.program.ssaha.DataStoreFactory)
  • class org.biojava.bio.program.ssaha.SearchListener.Echo (implements org.biojava.bio.program.ssaha.SearchListener)
  • class org.biojava.bio.program.ssaha.SearchListener.Tee (implements org.biojava.bio.program.ssaha.SearchListener)
  • class org.biojava.bio.program.ssaha.SearchListener.Wrapper (implements org.biojava.bio.program.ssaha.SearchListener)
    • class org.biojava.bio.program.ssaha.SearchListener.FilterByLength
  • class org.biojava.bio.program.ssaha.SequenceStreamer.FileStreamer (implements org.biojava.bio.program.ssaha.SequenceStreamer)
  • class org.biojava.bio.program.ssaha.SequenceStreamer.SequenceDBStreamer (implements org.biojava.bio.program.ssaha.SequenceStreamer)
  • class java.lang.Throwable (implements java.io.Serializable)
    • class java.lang.Exception
      • class org.biojava.bio.program.ssaha.SearchException

Interface Hierarchy

• interface org.biojava.bio.program.ssaha.DataStore
• interface org.biojava.bio.program.ssaha.DataStoreFactory
• interface org.biojava.bio.program.ssaha.SearchListener
• interface org.biojava.bio.program.ssaha.SequenceStreamer