Package org.biojava.bio.program.das.dasalignment

Class Summary
Alignment Alignment object to contain/manage a DAS alignment.
DASAlignmentCall  
DASAlignmentClient A DAS client that connects to a DAS aligmnent service and returns a Biojava Alignment object.
DASAlignmentXMLResponseParser a class to Parse the XML response of a DAS Alignment service returns an Alignment object
MSD_Mapping_ContentHandler parse MSD-XMLmapping of uniprot - PDB file retunr Aligmnent object To change the template for this generated type comment go to Window - Preferences - Java - Code Generation - Code and Comments
MSDMappingReader parse a MSD mapping file from PDB to uniprot and return a DAS- Alignment object
 

Exception Summary
DASException An exception of one of the DAS classes.