org.biojava.bio.program.das.dasalignment
Class DASAlignmentCall

java.lang.Object
  org.biojava.bio.program.das.dasalignment.DASAlignmentCall

public class DASAlignmentCall

extends Object

Constructor Summary

DASAlignmentCall()

DASAlignmentCall(String url)

Method Summary

ArrayList	getAlignments(String query) connect to a DAS structure service and retreive 3D data.
String	getServerurl() get url of structure service
void	setServerurl(String s) set url of structure service

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

DASAlignmentCall

public DASAlignmentCall()

DASAlignmentCall

public DASAlignmentCall(String url)

Method Detail

setServerurl

public void setServerurl(String s)

set url of structure service

getServerurl

public String getServerurl()

get url of structure service

getAlignments

public ArrayList getAlignments(String query)
                        throws IOException

connect to a DAS structure service and retreive 3D data. return a biojava Structure object

Throws:

IOException