org.biojava.bio.dp
Interface DPMatrix

All Known Implementing Classes:

PairDPMatrix, SingleDPMatrix

public interface DPMatrix

Author:

Matthew Pocock

Method Summary

double	getCell(int[] index)
double	getScore()
MarkovModel	model()
State[]	states()
SymbolList[]	symList()

Method Detail

states

public State[] states()

model

public MarkovModel model()

symList

public SymbolList[] symList()

getScore

public double getScore()

getCell

public double getCell(int[] index)
               throws IndexOutOfBoundsException

Throws:

IndexOutOfBoundsException