Uses of Interface
org.biojava.bio.symbol.TranslationTable

Packages that use TranslationTable

org.biojava.bio.seq	Classes and interfaces for defining biological sequences and informatics objects.
org.biojava.bio.symbol	Representation of the Symbols that make up a sequence, and locations within them.

Uses of TranslationTable in org.biojava.bio.seq

Methods in org.biojava.bio.seq that return TranslationTable

static TranslationTable

RNATools.getGeneticCode(java.lang.String name) Retrieve a TranslationTable by name.

Uses of TranslationTable in org.biojava.bio.symbol

Subinterfaces of TranslationTable in org.biojava.bio.symbol

interface

ReversibleTranslationTable A translation table that can also translate from the target to source alphabet.

Classes in org.biojava.bio.symbol that implement TranslationTable

class	SimpleReversibleTranslationTable A no-frills implementation of ReversibleTranslationTable that uses two Maps to map between symbols in a finite source alphabet into a finite target alphabet.
class	SimpleTranslationTable A no-frills implementation of TranslationTable that uses a Map to map from symbols in a finite source alphabet into a target alphabet.

Methods in org.biojava.bio.symbol with parameters of type TranslationTable

static SymbolList

SymbolListViews.translate(SymbolList symbols, TranslationTable table) Provides a 'translated' view of an underlying SymbolList.