Uses of Interface
org.biojava.bio.symbol.ReversibleTranslationTable

Packages that use ReversibleTranslationTable

org.biojava.bio.dist	Probability distributions over Alphabets.
org.biojava.bio.seq	Classes and interfaces for defining biological sequences and informatics objects.
org.biojava.bio.symbol	Representation of the Symbols that make up a sequence, and locations within them.

Uses of ReversibleTranslationTable in org.biojava.bio.dist

Methods in org.biojava.bio.dist that return ReversibleTranslationTable

ReversibleTranslationTable

TranslatedDistribution.getTable() Retrieve the translation table encapsulating the map from this emission spectrum to the underlying one.

Constructors in org.biojava.bio.dist with parameters of type ReversibleTranslationTable

TranslatedDistribution(ReversibleTranslationTable table, Distribution other, DistributionFactory distFact)
Users should make these thigs via getDistribuiton.

Uses of ReversibleTranslationTable in org.biojava.bio.seq

Methods in org.biojava.bio.seq that return ReversibleTranslationTable

static ReversibleTranslationTable	NucleotideTools.complementTable() Get a translation table for complementing Nucleotide symbols.
static ReversibleTranslationTable	RNATools.complementTable() Get a translation table for complementing DNA symbols.
static ReversibleTranslationTable	RNATools.transcriptionTable() Get a translation table for converting DNA to RNA.
static ReversibleTranslationTable	DNATools.complementTable() Get a translation table for complementing DNA symbols.

Uses of ReversibleTranslationTable in org.biojava.bio.symbol

Classes in org.biojava.bio.symbol that implement ReversibleTranslationTable

class

SimpleReversibleTranslationTable A no-frills implementation of ReversibleTranslationTable that uses two Maps to map between symbols in a finite source alphabet into a finite target alphabet.