org.biojava.bio.seq.ragbag
Class RagbagSoftRefSeqFactory

java.lang.Object
  |
  +--org.biojava.bio.seq.ragbag.RagbagSoftRefSeqFactory

All Implemented Interfaces:

RagbagSequenceFactory

public class RagbagSoftRefSeqFactory

extends java.lang.Object

implements RagbagSequenceFactory

class that is passed to a RagbagAssembly to use a SoftReferenceCache-backed RagbagCachedSequences.

Author:

David Huen

Constructor Summary

RagbagSoftRefSeqFactory()

Method Summary

org.biojava.bio.seq.ragbag.RagbagSequenceItf

getSequenceObject(java.lang.String name, java.lang.String urn) return a RagbagSequence object of desired type

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

RagbagSoftRefSeqFactory

public RagbagSoftRefSeqFactory()

Method Detail

getSequenceObject

public org.biojava.bio.seq.ragbag.RagbagSequenceItf getSequenceObject(java.lang.String name,
                                                                      java.lang.String urn)

Description copied from interface: RagbagSequenceFactory

return a RagbagSequence object of desired type

Specified by:

getSequenceObject in interface RagbagSequenceFactory