org.biojava.bio.seq.io
Class ProteinRefSeqProcessor

java.lang.Object
  |
  +--org.biojava.bio.seq.io.SequenceBuilderFilter
        |
        +--org.biojava.bio.seq.io.GenbankProcessor
              |
              +--org.biojava.bio.seq.io.ProteinRefSeqProcessor

All Implemented Interfaces:

ParseErrorSource, SeqIOListener, SequenceBuilder

public class ProteinRefSeqProcessor

extends GenbankProcessor

Class description

Author:

Greg Cox

Nested Class Summary

static class

ProteinRefSeqProcessor.Factory Factory which wraps sequence builders in a ProteinRefSeqProcessor

Nested classes inherited from class org.biojava.bio.seq.io.GenbankProcessor

GenbankProcessor.Factory

Field Summary

Fields inherited from class org.biojava.bio.seq.io.GenbankProcessor

features, PROPERTY_GENBANK_ACCESSIONS

Constructor Summary

ProteinRefSeqProcessor(SequenceBuilder theDelegate)

Methods inherited from class org.biojava.bio.seq.io.GenbankProcessor

addParseErrorListener, addSequenceProperty, endSequence, notifyParseErrorEvent, removeParseErrorListener

Methods inherited from class org.biojava.bio.seq.io.SequenceBuilderFilter

addFeatureProperty, addSymbols, endFeature, getDelegate, makeSequence, setName, setURI, startFeature, startSequence

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ProteinRefSeqProcessor

public ProteinRefSeqProcessor(SequenceBuilder theDelegate)