org.biojava.bio.seq.homol
Interface HomologyFeature

All Superinterfaces:

Annotatable, Changeable, Feature, FeatureHolder, StrandedFeature

All Known Implementing Classes:

SimpleHomologyFeature

public interface HomologyFeature

extends StrandedFeature

Author:

Matthew Pocock, Keith James

Nested Class Summary

static class

HomologyFeature.Template

Nested classes inherited from class org.biojava.bio.seq.StrandedFeature

StrandedFeature.Strand

Nested classes inherited from class org.biojava.bio.seq.Feature

Feature.ByLocationComparator

Nested classes inherited from class org.biojava.bio.seq.FeatureHolder

FeatureHolder.EmptyFeatureHolder

Nested classes inherited from class org.biojava.bio.Annotatable

Annotatable.AnnotationForwarder

Field Summary

Fields inherited from interface org.biojava.bio.seq.StrandedFeature

NEGATIVE, POSITIVE, UNKNOWN

Fields inherited from interface org.biojava.bio.seq.Feature

byLocationOrder, LOCATION, PROPERTY_DATA_KEY, SOURCE, TYPE

Fields inherited from interface org.biojava.bio.seq.FeatureHolder

EMPTY_FEATURE_HOLDER, FEATURES, SCHEMA

Fields inherited from interface org.biojava.bio.Annotatable

ANNOTATION

Method Summary

Homology

getHomology()

Methods inherited from interface org.biojava.bio.seq.StrandedFeature

getStrand, getSymbols

Methods inherited from interface org.biojava.bio.seq.Feature

features, getLocation, getParent, getSequence, getSource, getType, makeTemplate, setLocation, setSource, setType

Methods inherited from interface org.biojava.bio.seq.FeatureHolder

containsFeature, countFeatures, createFeature, filter, filter, getSchema, removeFeature

Methods inherited from interface org.biojava.utils.Changeable

addChangeListener, addChangeListener, isUnchanging, removeChangeListener, removeChangeListener

Methods inherited from interface org.biojava.bio.Annotatable

getAnnotation

Method Detail

getHomology

public Homology getHomology()