org.biojava.bio.program.ssaha
Class SequenceStreamer.FileStreamer

java.lang.Object
  |
  +--org.biojava.bio.program.ssaha.SequenceStreamer.FileStreamer

All Implemented Interfaces:

SequenceStreamer

Enclosing class:

SequenceStreamer

public static class SequenceStreamer.FileStreamer

extends java.lang.Object

implements SequenceStreamer

Nested Class Summary

Nested classes inherited from class org.biojava.bio.program.ssaha.SequenceStreamer

SequenceStreamer.FileStreamer, SequenceStreamer.SequenceDBStreamer

Constructor Summary

SequenceStreamer.FileStreamer(SequenceFormat format, SymbolTokenization toke, java.io.File f)

SequenceStreamer.FileStreamer(SequenceFormat format, SymbolTokenization toke, java.util.List files)

Method Summary

boolean	hasNext()
void	reset()
void	streamNext(SeqIOListener listener)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SequenceStreamer.FileStreamer

public SequenceStreamer.FileStreamer(SequenceFormat format,
                                     SymbolTokenization toke,
                                     java.util.List files)

SequenceStreamer.FileStreamer

public SequenceStreamer.FileStreamer(SequenceFormat format,
                                     SymbolTokenization toke,
                                     java.io.File f)

Method Detail

reset

public void reset()

Specified by:

reset in interface SequenceStreamer

hasNext

public boolean hasNext()

Specified by:

hasNext in interface SequenceStreamer

streamNext

public void streamNext(SeqIOListener listener)
                throws BioException,
                       java.io.IOException

Specified by:

streamNext in interface SequenceStreamer

BioException

java.io.IOException