org.biojava.bio.program.gff
Class GFFRecordFilter.SourceFilter

java.lang.Object
  |
  +--org.biojava.bio.program.gff.GFFRecordFilter.SourceFilter

All Implemented Interfaces:

GFFRecordFilter

Enclosing class:

GFFRecordFilter

public static class GFFRecordFilter.SourceFilter

extends java.lang.Object

implements GFFRecordFilter

Implementation of GFFRecordFilter that accepts records based upon the source field.

Author:

Matthew Pocock

Nested Class Summary

Nested classes inherited from class org.biojava.bio.program.gff.GFFRecordFilter

GFFRecordFilter.AcceptAll, GFFRecordFilter.FeatureFilter, GFFRecordFilter.FrameFilter, GFFRecordFilter.NotFilter, GFFRecordFilter.SequenceFilter, GFFRecordFilter.SourceFilter, GFFRecordFilter.StrandFilter

Field Summary

Fields inherited from interface org.biojava.bio.program.gff.GFFRecordFilter

ACCEPT_ALL

Constructor Summary

GFFRecordFilter.SourceFilter()

GFFRecordFilter.SourceFilter(java.lang.String source)

Method Summary

boolean	accept(GFFRecord record) Return whether or not to accept record.
java.lang.String	getSource() Retrieve the current source.
void	setSource(java.lang.String source) Set the source to source.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GFFRecordFilter.SourceFilter

public GFFRecordFilter.SourceFilter()

GFFRecordFilter.SourceFilter

public GFFRecordFilter.SourceFilter(java.lang.String source)

Method Detail

getSource

public java.lang.String getSource()

Retrieve the current source.

Returns:

the source String

setSource

public void setSource(java.lang.String source)

Set the source to source.

Parameters:

source - the new source to match

accept

public boolean accept(GFFRecord record)

Description copied from interface: GFFRecordFilter

Return whether or not to accept record.

Specified by:

accept in interface GFFRecordFilter

Returns:

record. getSource() == this.getSource()