All Classes

AbstractFilter (87.5%) AbstractGraph (52%) AbstractGraphNode (66.7%) AbstractLevelFilter (81.5%) AbstractNamedDoubleMatrix (0%) AbstractNamedMatrix (69.6%) AbstractNamedMatrixReader (80.4%) AffymetrixProbeNameFilter (0%) AppDialog (0%) AppDialog.HelpEditorPane (0%) AppDialog.LinkFollower (0%) AppDialog_actionButton_actionAdapter (0%) AppDialog_cancelButton_actionAdapter (0%) AppDialog_helpButton_actionAdapter (0%) AppDialog_mouselistener_actionAdapter (0%) AverageLinkageDistancer (0%) BinaryTree (0%) BinaryTreeNode (0%) BrowserLauncher (0%) ByteArrayConverter (22.8%) ClassSizeComparator (0%) Cluster (0%) ClusterNode (0%) ColorMap (0%) ColorMatrix (0%) CorrelationEffectMetaAnalysis (80%) CorrelationStats (13.6%) DataFileFilter (0%) DenseDoubleMatrix1D (0%) DenseDoubleMatrix2DNamed (28.6%) DescriptiveWithMissing (47.1%) DirectedGraph (62.2%) DirectedGraphNode (67.1%) Dirichlet (0%) Distance (0%) DoubleMatrix2DNamedFactory (0%) DoubleMatrixReader (55.1%) FileTools (0%) GOEntry (71.4%) GOHandler (98.2%) GONames (0%) GOParser (58.6%) GeneAnnotations (0%) GeneSet (0%) GeneSetMapTools (0%) GroupMap (0%) GuiUtil (0%) Handle (0%) HierarchicalClusterer (0%) HistogramWriter (80%) ImageFileFilter (0%) IndexScoreDyad (70%) ItemLevelFilter (82.1%) JBarGraphCellRenderer (0%) JGradientBar (0%) JGradientLabel (0%) JLinkLabel (0%) JMatrixCellRenderer (0%) JMatrixDisplay (0%) JNumberLabel (0%) JVerticalHeaderRenderer (0%) JWebBrowser (0%) KSTest (86.6%) Link (0%) MapReader (47.5%) MatrixRowStats (96.9%) MatrixStats (63.2%) MeanDifferenceMetaAnalysis (45.7%) MetaAnalysis (39.7%) MultipleTestCorrection (0%) NormalProbabilityComputer (0%) OntologyEntry (55.6%) Point (0%) Queue (94.6%) RCDoubleMatrix1D (75.9%) ROC (68.9%) RandomChooser (0%) Rank (94.9%) RankProp (0%) RegressionTesting (38.2%) RowAbsentFilter (82.1%) RowAffyNameFilter (96.6%) RowLevelFilter (88.8%) RowMissingFilter (100%) RowNameFilter (86.8%) SparseDoubleMatrix2DNamed (43.6%) SparseDoubleMatrixReader (79.8%) SparseRaggedDouble2DNamedMatrixReader (75.3%) SparseRaggedDoubleMatrix2DNamed (71.6%) SpecFunc (70.8%) Stack (85.7%) Stats (91.3%) StatusDebugLogger (0%) StatusJlabel (0%) StatusStderr (0%) StringConverter (74.4%) StringMatrix2DNamed (31.7%) StringMatrixReader (80.7%) TableSorter (0%) TableSorter.Arrow (0%) TableSorter.Directive (0%) TableSorter.MouseHandler (0%) TableSorter.Row (0%) TableSorter.SortableHeaderRenderer (0%) TableSorter.TableModelHandler (0%) Tree (0%) TreeNode (0%) TreePanel (0%) UndirectedGraphNode (0%) UniformDensityComputer (0%) UniformProbabilityComputer (51.5%) Util (0%) Visitable (0%) Wishart (82.4%) Wizard (0%) WizardStep (0%) Wizard_backButton_actionAdapter (0%) Wizard_cancelButton_actionAdapter (0%) Wizard_finishButton_actionAdapter (0%) Wizard_nextButton_actionAdapter (0%) XMLFileFilter (0%) keyAndValueData (77.8%) rankData (100%)