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## Uses of Class
baseCode.dataStructure.matrix.DenseDoubleMatrix2DNamed

Packages that use DenseDoubleMatrix2DNamed
baseCode.dataStructure.matrix |
baseCode.gui |
baseCode.io.reader |
baseCode.math |
baseCode.misc |

Uses of DenseDoubleMatrix2DNamed in baseCode.dataStructure.matrix

Methods in baseCode.dataStructure.matrix that return DenseDoubleMatrix2DNamed
`DenseDoubleMatrix2DNamed` | `DenseDoubleMatrix2DNamed.copy()` Make a copy of a matrix.
`static DenseDoubleMatrix2DNamed` | `DoubleMatrix2DNamedFactory.dense(double[][] T)`
`static DenseDoubleMatrix2DNamed` | `DoubleMatrix2DNamedFactory.dense(int cols, int rows)`

Uses of DenseDoubleMatrix2DNamed in baseCode.gui

Constructors in baseCode.gui with parameters of type DenseDoubleMatrix2DNamed
`ColorMatrix(DenseDoubleMatrix2DNamed matrix)`
`JMatrixDisplay(DenseDoubleMatrix2DNamed matrix)`

Uses of DenseDoubleMatrix2DNamed in baseCode.io.reader

Methods in baseCode.io.reader that return DenseDoubleMatrix2DNamed
`protected DenseDoubleMatrix2DNamed` | `DoubleMatrixReader.createMatrix(java.util.List MTemp, int rowCount, int colCount, java.util.List rowNames, java.util.List colNames)`

Uses of DenseDoubleMatrix2DNamed in baseCode.math

Methods in baseCode.math that return DenseDoubleMatrix2DNamed
`static DenseDoubleMatrix2DNamed` | `MatrixStats.correlationMatrix(AbstractNamedDoubleMatrix data)`

Methods in baseCode.math with parameters of type DenseDoubleMatrix2DNamed
`static cern.colt.list.DoubleArrayList` | `MatrixRowStats.sumOfSquares(DenseDoubleMatrix2DNamed M)` Calculates the sum of squares for each row of a matrix
`static cern.colt.list.DoubleArrayList` | `MatrixRowStats.means(DenseDoubleMatrix2DNamed M)` Calculates the means of a matrix's rows.
`static cern.colt.list.DoubleArrayList` | `MatrixRowStats.sums(DenseDoubleMatrix2DNamed M)` Calculate the sums of a matrix's rows.
`static cern.colt.list.DoubleArrayList` | `MatrixRowStats.sampleStandardDeviations(DenseDoubleMatrix2DNamed M)` Calculates the sample standard deviation of each row of a matrix

Uses of DenseDoubleMatrix2DNamed in baseCode.misc

Methods in baseCode.misc with parameters of type DenseDoubleMatrix2DNamed
`java.util.Map` | `GroupMap.read(java.lang.String filename, DenseDoubleMatrix2DNamed dataMatrix)` The input file format is that used by `MapReader`.

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