Clover coverage report - baseCode - 0.2.5
Coverage timestamp: Tue Apr 12 2005 11:31:58 EDT
Overview   Package   File
    FRAMES   NO FRAMES  
file stats: LOC: 98   Methods: 5
NCLOC: 58   Classes: 1
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 Source file Conditionals Statements Methods TOTAL
RowNameFilter.java 92.9% 88.2% 60% 86.8%
coverage coverage
 1    
 /*
 2    
  * Created on Jun 16, 2004
 3    
  */
 4    
 package baseCode.dataFilter;
 5    
 
 6    
 import java.util.Set;
 7    
 import java.util.Vector;
 8    
 
 9    
 import baseCode.dataStructure.matrix.NamedMatrix;
 10    
 
 11    
 /**
 12    
  * Remove or retain rows that are on a list.
 13    
  *
 14    
  * @author Paul Pavlidis
 15    
  * @version $Id: RowNameFilter.java,v 1.10 2004/07/27 03:18:58 pavlidis Exp $
 16    
  */
 17    
 public class RowNameFilter extends AbstractFilter implements Filter {
 18    
 
 19    
    private boolean exclude = false;
 20    
    private Set filterNames;
 21    
 
 22    
    /**
 23    
     * @param namesToFilter
 24    
     * @param exclude Set to true if you want the list to indicate items to be skipped, rather than selected.
 25    
     */
 26  2 
    public RowNameFilter( Set namesToFilter, boolean exclude ) {
 27  2 
       this( namesToFilter );
 28  2 
       this.exclude = exclude;
 29    
    }
 30    
 
 31    
    /**
 32    
     * @param namesToFilter
 33    
     */
 34  4 
    public RowNameFilter( Set namesToFilter ) {
 35  4 
       filterNames = namesToFilter;
 36    
    }
 37    
 
 38  0 
    public RowNameFilter() {
 39  0 
       filterNames = null;
 40    
    }
 41    
 
 42  0 
    public void setFilterNames( Set namesToFilter, boolean exclude ) {
 43  0 
       this.filterNames = namesToFilter;
 44  0 
       this.exclude = exclude;
 45    
    }
 46    
 
 47    
    /**
 48    
     * Filter according to row names.
 49    
     *
 50    
     * @param data
 51    
     * @return
 52    
     */
 53  4 
    public NamedMatrix filter( NamedMatrix data ) {
 54  4 
       Vector MTemp = new Vector();
 55  4 
       Vector rowNames = new Vector();
 56  4 
       int numRows = data.rows();
 57  4 
       int numCols = data.columns();
 58  4 
       int numNeeded = filterNames.size();
 59  4 
       int kept = 0;
 60  4 
       for ( int i = 0; i < numRows; i++ ) {
 61  120 
          String name = data.getRowName( i );
 62    
 
 63    
          // apply the rules.
 64  120 
          if ( filterNames.contains( name ) ) {
 65  16 
             if ( exclude ) {
 66  8 
                continue;
 67    
             }
 68  8 
             MTemp.add( data.getRowObj( i ) );
 69  8 
             rowNames.add( name );
 70  8 
             kept++;
 71  8 
             if ( kept >= numNeeded ) {
 72  0 
                break; // no use in continuing.
 73    
             }
 74    
          }
 75    
 
 76  112 
          if ( exclude ) {
 77  52 
             MTemp.add( data.getRowObj( i ) );
 78  52 
             rowNames.add( name );
 79  52 
             kept++;
 80    
          }
 81    
       }
 82    
 
 83  4 
       NamedMatrix returnval = getOutputMatrix( data, MTemp.size(), numCols );
 84    
 
 85  4 
       for ( int i = 0; i < MTemp.size(); i++ ) {
 86  60 
          for ( int j = 0; j < numCols; j++ ) {
 87  720 
             returnval.set( i, j, ( ( Object[] ) MTemp.get( i ) )[j] );
 88    
          }
 89    
       }
 90  4 
       returnval.setColumnNames( data.getColNames() );
 91  4 
       returnval.setRowNames( rowNames );
 92    
 
 93  4 
       log.info( "There are " + kept + " rows left after filtering." );
 94    
 
 95  4 
       return ( returnval );
 96    
    }
 97    
 
 98    
 }
 
CloverReport generated by Clover v1.2.3
Tue Apr 12 2005 11:31:59 EDT.		   30 day Evaluation Version distributed via the Maven Jar Repository. Clover is not free. You have 30 days to evaluate it.