All Classes

AbstractFilter AbstractGraph AbstractGraphNode AbstractLevelFilter AbstractNamedDoubleMatrix AbstractNamedMatrix AbstractNamedMatrixReader AffymetrixProbeNameFilter Algorithm AppDialog AverageLinkageDistancer BinaryTree BinaryTreeNode BrowserLauncher ByteArrayConverter Cluster ClusteringAlgorithm ColorMap ColorMatrix Constants CorrelationEffectMetaAnalysis CorrelationStats DataFileFilter DenseDoubleMatrix1D DenseDoubleMatrix2DNamed DensityGenerator DescriptiveWithMissing DirectedGraph DirectedGraphNode Dirichlet Distance DistanceFactory Distanceable Distancer DoubleMatrix2DNamedFactory DoubleMatrixReader FileTools Filter GOEntry GONames GOParser GOTermList GOTermProbability GeneAnnotations GeneSetMapTools Graph GraphNode GroupMap GuiUtil Handle HierarchicalClusterer HistogramWriter ImageFileFilter ItemLevelFilter JBarGraphCellRenderer JGradientBar JLinkLabel JMatrixCellRenderer JMatrixDisplay JVerticalHeaderRenderer JWebBrowser KSTest Link MapReader MatrixRowStats MatrixStats MeanDifferenceMetaAnalysis MetaAnalysis MultipleTestCorrection NamedMatrix NormalProbabilityComputer OntologyEntry Point ProbabilityComputer Queue RCDoubleMatrix1D ROC RandomChooser Rank RankProp Ranker RegressionTesting RowAbsentFilter RowAffyNameFilter RowLevelFilter RowMissingFilter RowNameFilter Similarity SparseDoubleMatrix2DNamed SparseDoubleMatrixReader SparseRaggedDouble2DNamedMatrixReader SparseRaggedDoubleMatrix2DNamed SpecFunc Stack Stats StatusDebugLogger StatusJlabel StatusStderr StatusViewer StringConverter StringMatrix2DNamed StringMatrixReader TableSorter Tree TreeNode TreePanel UndirectedGraphNode UniformDensityComputer UniformProbabilityComputer Util Visitable Wishart Wizard WizardStep XMLFileFilter